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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911108.1_cds_XP_016461125.1_54474
CDS Infomation

[gene=LOC107784495] [db_xref=GeneID:107784495] [protein=pectinesterase 1-like] [protein_id=XP_016461125.1] [location=join(9008..9223,9757..10035,10436..10642,11195..11436,12283..12442)] [gbkey=CDS]
Sequence

ATGGCCGGAAAAAACACCATATTTGCTGTGGAAGCAATTGTTATAACTATTGTCCTTTTC
ATCCCTAGAGTCTTTTCAGATGATTCTGTTCCTATACCAGCTGATAAATCACAAATAAAT
AGTTGGTTTGAAACCAATGTTAAGCCTTTAGATGCAAGAAAAGACACTTTGGACCCTGCC
CTTGTAGCTGCCGAGGCTAATAAAACTACCATTAAGGTAAGGGCAGATGGAAGTGGTGAA
TTCAAGACTCTGACGGATGCCATAAACAGCATTCCTCAAGGGAATAAAAGACGAGTTATT
ATTTCGATTGGAGGTGGAAATTACACAGAGAAAGTTAAGATTGAGAGGTATAAGCCTTTC
ATTACATTATATGGAGACCCTAAGAATGTACCAAATATAATCTTTAATGGAACAGCAAAA
GATTATGGTACAGTTGATAGTGCCACCGTCGTCGTTGAATCTGAATACTTCACCGCTGTT
AATATCAACTTTGTGAATTCTGCACCAAGACCAGATGGGAAAAGGGAATTAGCTCAAGCA
GCAGCATTAAGGACAGGAGGAGATAAAGCTTCATTATATAACTGTAAAATGTATGGATTT
CAAGACACCTTTTGTGATGACAGTGGGAAGCATTTCTTTAAAGATTGCTACATTGAAGGC
ACTGTTGATTTCATCTTTGGCAATGGAAAATCCTTATATCTGAACACAGAGATGCATGTA
ATTCCAGGGGATCCAATGGCAATGATCACAGCACATGCAAGGGGAGCAGGCAATGTTGAC
AGTGGATATTCATTTGTTCATTGTATAATAACTGGAACAGGAAATACAGCATTTTTGGGA
AGAGCATGGAAGCCTTTTGCTAAGGTTGTTTACTCTTACACTGATATGAGTGACGTTGTT
CACCCTGAAGGTTGGTCTGATAACGGCAAAAGTGATTATGACAGGTCGGTGTTTTATGGA
GAATACAACTGCAAAGGAGCAGGTGCAACTATGGAACGTAGGGTGGGATATGTGAGGAAA
TTAACTGATGCAGAAGCAAAGCCTTTTATCACACTTGGCTATATTGAAGGCTCCAAATGG
CTGCTTCCTCCTGTGGCACTGTAG

Peptide Sequence

PEP ID

XP_016461125.1
PEP Infomation

PREDICTED: pectinesterase 1-like [Nicotiana tabacum]
Sequence

MAGKNTIFAVEAIVITIVLFIPRVFSDDSVPIPADKSQINSWFETNVKPLDARKDTLDPA
LVAAEANKTTIKVRADGSGEFKTLTDAINSIPQGNKRRVIISIGGGNYTEKVKIERYKPF
ITLYGDPKNVPNIIFNGTAKDYGTVDSATVVVESEYFTAVNINFVNSAPRPDGKRELAQA
AALRTGGDKASLYNCKMYGFQDTFCDDSGKHFFKDCYIEGTVDFIFGNGKSLYLNTEMHV
IPGDPMAMITAHARGAGNVDSGYSFVHCIITGTGNTAFLGRAWKPFAKVVYSYTDMSDVV
HPEGWSDNGKSDYDRSVFYGEYNCKGAGATMERRVGYVRKLTDAEAKPFITLGYIEGSKW
LLPPVAL

Transcript Sequence

Gene sequence data has not been registered.